Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL71234.1 | SDL71261.1 | SAMN05216244_0505 | SAMN05216244_0506 | Hypothetical protein. | Protein of unknown function. | 0.679 |
SDL71261.1 | SDL71234.1 | SAMN05216244_0506 | SAMN05216244_0505 | Protein of unknown function. | Hypothetical protein. | 0.679 |
SDL71261.1 | SDL72460.1 | SAMN05216244_0506 | SAMN05216244_0551 | Protein of unknown function. | YlzJ-like protein. | 0.664 |
SDL71261.1 | SDL74624.1 | SAMN05216244_0506 | SAMN05216244_0624 | Protein of unknown function. | Hypothetical protein. | 0.644 |
SDL71261.1 | SDL97528.1 | SAMN05216244_0506 | SAMN05216244_1410 | Protein of unknown function. | Spore coat protein CotO. | 0.666 |
SDL71261.1 | SDM00726.1 | SAMN05216244_0506 | SAMN05216244_1517 | Protein of unknown function. | Sporulation protein YhaL. | 0.669 |
SDL71261.1 | SDM71311.1 | SAMN05216244_0506 | SAMN05216244_3277 | Protein of unknown function. | DUF4097 and DUF4098 domain-containing protein YvlB. | 0.650 |
SDL71261.1 | SDM87490.1 | SAMN05216244_0506 | SAMN05216244_3610 | Protein of unknown function. | HlyD family secretion protein. | 0.705 |
SDL71261.1 | SDM87519.1 | SAMN05216244_0506 | SAMN05216244_3611 | Protein of unknown function. | Glyoxalase-like domain-containing protein. | 0.635 |
SDL71261.1 | SDM98463.1 | SAMN05216244_0506 | SAMN05216244_3903 | Protein of unknown function. | Hypothetical protein. | 0.733 |
SDL71261.1 | dnaA | SAMN05216244_0506 | SAMN05216244_2372 | Protein of unknown function. | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.899 |
SDL72460.1 | SDL71261.1 | SAMN05216244_0551 | SAMN05216244_0506 | YlzJ-like protein. | Protein of unknown function. | 0.664 |
SDL72460.1 | SDL97528.1 | SAMN05216244_0551 | SAMN05216244_1410 | YlzJ-like protein. | Spore coat protein CotO. | 0.647 |
SDL72460.1 | SDM00726.1 | SAMN05216244_0551 | SAMN05216244_1517 | YlzJ-like protein. | Sporulation protein YhaL. | 0.466 |
SDL72460.1 | SDM98463.1 | SAMN05216244_0551 | SAMN05216244_3903 | YlzJ-like protein. | Hypothetical protein. | 0.619 |
SDL74624.1 | SDL71261.1 | SAMN05216244_0624 | SAMN05216244_0506 | Hypothetical protein. | Protein of unknown function. | 0.644 |
SDL74624.1 | SDM71311.1 | SAMN05216244_0624 | SAMN05216244_3277 | Hypothetical protein. | DUF4097 and DUF4098 domain-containing protein YvlB. | 0.583 |
SDL74624.1 | SDM87490.1 | SAMN05216244_0624 | SAMN05216244_3610 | Hypothetical protein. | HlyD family secretion protein. | 0.454 |
SDL74624.1 | SDM87519.1 | SAMN05216244_0624 | SAMN05216244_3611 | Hypothetical protein. | Glyoxalase-like domain-containing protein. | 0.463 |
SDL74624.1 | SDM98463.1 | SAMN05216244_0624 | SAMN05216244_3903 | Hypothetical protein. | Hypothetical protein. | 0.604 |
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