STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM81834.1Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains. (378 aa)    
Predicted Functional Partners:
SDM26609.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.642
SDM55925.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.642
SDM28905.1
Two-component system, CitB family, sensor histidine kinase CitS.
  
 
 0.628
SDL82990.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.596
SDL83307.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.594
SDM44591.1
LPXTG-motif cell wall anchor domain-containing protein/conserved repeat domain-containing protein.
 
     0.581
SDM22152.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.531
SDM44893.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.464
SDM18289.1
Two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS.
 
 
 0.453
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.441
Your Current Organism:
Sediminibacillus halophilus
NCBI taxonomy Id: 482461
Other names: CCM 7364, CECT 7148, CGMCC 1.6199, DSM 18088, S. halophilus, Sediminibacillus halophilus Carrasco et al. 2008, strain EN8d
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