STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX46385.1Hypothetical protein. (47 aa)    
Predicted Functional Partners:
OPX46386.1
Hypothetical protein.
       0.773
OPX46387.1
Hypothetical protein.
       0.757
OPX46388.1
Hypothetical protein.
       0.757
OPX46389.1
Hypothetical protein.
       0.757
OPX46390.1
Hypothetical protein.
       0.726
OPX46384.1
Phage tail protein.
       0.613
OPX46383.1
Prophage endopeptidase tail.
       0.556
OPX46391.1
Hypothetical protein.
       0.529
OPX46392.1
Hypothetical protein; S-layer homology domain.
       0.529
OPX46393.1
Holin family protein.
       0.529
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.