STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfkN_1Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family. (520 aa)    
Predicted Functional Partners:
guaB_1
Inosine-5'-monophosphate dehydrogenase.
    
 0.942
cinA
Putative competence-damage inducible protein; Belongs to the CinA family.
  
 
  0.886
deoD
Purine nucleoside phosphorylase DeoD-type.
    
  0.885
guaA_2
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.877
thrZ
threonine--tRNA ligase 2.
  
 
 0.871
glpE
Thiosulfate sulfurtransferase GlpE.
    
 0.854
nadR
Trifunctional NAD biosynthesis/regulator protein NadR.
     
 0.847
gmhB
D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase.
  
 
 0.833
OPX42039.1
Hypothetical protein.
  
 
 0.826
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
 0.825
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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