STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnB_1Nitrogen regulatory protein P-II. (108 aa)    
Predicted Functional Partners:
glnB_2
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
   
0.811
nrgA_1
Ammonium transporter NrgA.
  
 0.773
amt
Ammonia channel precursor; Belongs to the P(II) protein family.
  
 0.773
nrgA_2
Ammonium transporter NrgA.
  
 0.773
nifD_7
Nitrogenase molybdenum-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.743
guaA_1
GMP synthase.
 
   
 0.720
nifK_3
Nitrogenase molybdenum-iron protein beta chain; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.715
nifD_6
Nitrogenase molybdenum-iron protein alpha chain.
 
 
 0.701
glnB_4
Nitrogen regulatory protein P-II.
 
    0.686
OPX45922.1
Pyridoxamine 5'-phosphate oxidase.
       0.680
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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