STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctc_1S-layer protein precursor. (342 aa)    
Predicted Functional Partners:
xynA1_8
Endo-1,4-beta-xylanase A precursor.
 
     0.780
xynA1_11
Endo-1,4-beta-xylanase A precursor.
  
     0.775
xynA1_12
Endo-1,4-beta-xylanase A precursor.
  
     0.775
ancA_1
Cellulosome-anchoring protein precursor.
  
     0.774
sap
S-layer protein sap precursor.
  
     0.768
xynA1_2
Endo-1,4-beta-xylanase A precursor.
  
     0.761
ctc_2
S-layer protein precursor.
  
     0.758
OPX43327.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.737
epsF_1
Putative glycosyltransferase EpsF.
  
     0.712
xynA1_3
Endo-1,4-beta-xylanase A precursor.
  
     0.707
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.