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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sapS-layer protein sap precursor. (889 aa)    
Predicted Functional Partners:
OPX45433.1
Heptaprenyl diphosphate synthase component I.
 
     0.808
ctc_1
S-layer protein precursor.
  
     0.768
ancA_1
Cellulosome-anchoring protein precursor.
  
     0.768
OPX43327.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.745
OPX45434.1
Hypothetical protein.
 
     0.704
yedZ
Sulfoxide reductase heme-binding subunit YedZ.
 
    
0.703
apbE_1
Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
  
  
 0.682
ctc_2
S-layer protein precursor.
  
     0.671
OPX43585.1
Cell surface protein precursor.
  
     0.637
OPX44265.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.619
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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