STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX45099.1Putative thiazole biosynthetic enzyme. (457 aa)    
Predicted Functional Partners:
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 
 0.794
OPX45098.1
Putative thiazole biosynthetic enzyme.
 
    
0.719
ppsC
Plipastatin synthase subunit C.
    
  0.702
acrB_1
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.603
acrB_2
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.603
acrB_3
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.603
OPX45097.1
D-tagatose 3-epimerase.
       0.592
acrA_1
acryloyl-CoA reductase electron transfer subunit beta.
  
 
 0.575
pksJ
Polyketide synthase PksJ.
    
 0.569
acrA_2
acryloyl-CoA reductase electron transfer subunit beta.
  
 
 0.486
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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