STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX45126.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
perR_1
Peroxide operon regulator; Belongs to the Fur family.
  
    0.630
perR_3
Peroxide-responsive repressor PerR; Belongs to the Fur family.
  
    0.630
ndhI_4
NAD(P)H-quinone oxidoreductase subunit I.
  
 
   0.616
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
    0.608
perR_2
Peroxide-responsive repressor PerR; Belongs to the Fur family.
  
    0.608
hycG_1
Formate hydrogenlyase subunit 7.
   
   0.561
ndhI_3
NAD(P)H-quinone oxidoreductase subunit I.
    
   0.552
ubiE_2
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE.
       0.496
OPX45125.1
Hypothetical protein.
       0.412
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.