STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araQ_4L-arabinose transport system permease protein AraQ. (303 aa)    
Predicted Functional Partners:
araP_2
L-arabinose transport system permease protein AraP.
 
 0.982
araP_1
L-arabinose transport system permease protein AraP.
 
 0.978
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.971
sugC_3
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.965
OPX44972.1
Bacterial extracellular solute-binding protein.
 
 0.959
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.939
lacF_1
Lactose transport system permease protein LacF.
 0.924
lacF_2
Lactose transport system permease protein LacF.
 0.924
lacF_3
Lactose transport system permease protein LacF.
 0.924
araP_3
L-arabinose transport system permease protein AraP.
 
 0.919
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.