STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hndD_1NADP-reducing hydrogenase subunit HndC. (603 aa)    
Predicted Functional Partners:
hndC_1
NADP-reducing hydrogenase subunit HndC.
 
 0.999
hndC_3
NADP-reducing hydrogenase subunit HndC.
 0.997
hndC_4
NADP-reducing hydrogenase subunit HndC.
 0.997
hndA_1
NADP-reducing hydrogenase subunit HndA.
 0.995
hydA_2
Periplasmic hydrogenase large subunit.
 
 
0.992
acrA_1
acryloyl-CoA reductase electron transfer subunit beta.
   
 0.990
hycG_1
Formate hydrogenlyase subunit 7.
  
 0.988
hndC_2
NADP-reducing hydrogenase subunit HndC.
 
 0.982
hndA_4
NADP-reducing hydrogenase subunit HndA.
 0.979
hndA_2
NADP-reducing hydrogenase subunit HndA.
 0.977
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.