STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX44481.1Hypothetical protein; Aerotolerance regulator N-terminal. (615 aa)    
Predicted Functional Partners:
OPX44480.1
Von Willebrand factor type A domain protein.
     0.984
OPX44482.1
Hypothetical protein.
 
  
 0.957
OPX44487.1
Hypothetical protein.
 
 
  0.908
OPX44484.1
Hypothetical protein.
 
     0.886
OPX44485.1
ABC-2 family transporter protein.
 
     0.885
OPX44483.1
ATPase family.
 
 
 0.870
ybhF_5
Putative ABC transporter ATP-binding protein YbhF.
 
     0.835
OPX43748.1
Glycosyl transferases group 1.
  
 0.801
cypM_1
Cypemycin methyltransferase.
 
 
 0.631
OPX44392.1
Von Willebrand factor type A domain protein.
  
     0.599
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.