STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsA_4ABC-type transporter ATP-binding protein EcsA. (298 aa)    
Predicted Functional Partners:
OPX44347.1
ABC-2 family transporter protein.
  
 0.969
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
 
    
0.906
tauB_4
Taurine import ATP-binding protein TauB.
 
    
0.904
ybhS
Inner membrane transport permease YbhS.
 
      0.900
livF_2
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
     
0.898
ssuB_4
Aliphatic sulfonates import ATP-binding protein SsuB.
 
     
0.895
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     
0.893
ytrE
ABC transporter ATP-binding protein YtrE.
 
    
0.878
glnQ_4
Glutamine transport ATP-binding protein GlnQ.
 
     
0.875
OPX45200.1
ABC-2 family transporter protein.
  
 0.873
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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