STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_4Macrolide export ATP-binding/permease protein MacB. (390 aa)    
Predicted Functional Partners:
macB_5
Macrolide export ATP-binding/permease protein MacB.
 0.997
macB_1
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 0.994
macB_6
Macrolide export ATP-binding/permease protein MacB.
 0.994
macA
Macrolide export protein MacA.
 
 
 0.990
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
 0.987
ytrE
ABC transporter ATP-binding protein YtrE.
 0.986
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
 0.986
lolD_3
Lipoprotein-releasing system ATP-binding protein LolD.
 0.985
lolD_4
Lipoprotein-releasing system ATP-binding protein LolD.
 0.978
bceA
Bacitracin export ATP-binding protein BceA.
 0.972
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.