STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX44453.1Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (321 aa)    
Predicted Functional Partners:
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.993
OPX44452.1
L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.991
OPX42239.1
D-allose transporter subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
rbsA_1
Ribose import ATP-binding protein RbsA.
 
 0.975
tmpC_2
Membrane lipoprotein TmpC precursor.
 
 
 0.975
mglA_4
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.970
tmpC_1
Membrane lipoprotein TmpC precursor.
 
 
 0.952
mglC_1
Galactoside transport system permease protein MglC.
 
0.939
OPX42237.1
Purine-binding protein precursor.
 
 
 0.908
OPX45711.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.793
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.