STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manA_3Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family. (573 aa)    
Predicted Functional Partners:
manA_4
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
  
 
0.826
manA_1
Beta-mannanase/endoglucanase A precursor.
 
  
0.823
celCCA_2
Endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
0.819
OPX42280.1
Endoglucanase E1 precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.817
celE
Endoglucanase E precursor.
 
  
0.809
xynA_1
Endo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
 0.781
glcK_1
Glucokinase.
   
 
  0.680
OPX43850.1
4-O-beta-D-mannosyl-D-glucose phosphorylase; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
   
 0.671
celD_2
Endoglucanase D precursor.
  
  
 0.669
yesW
Rhamnogalacturonan endolyase YesW precursor.
  
  
 0.666
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.