STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX44092.1FIST N domain protein. (356 aa)    
Predicted Functional Partners:
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 
 0.557
arcB
Aerobic respiration control sensor protein ArcB.
  
 
 0.510
bdhA
NADH-dependent butanol dehydrogenase A.
       0.509
regX3_1
Sensory transduction protein regX3.
  
    0.413
arlR
Response regulator ArlR.
  
    0.413
czcR
Transcriptional activator protein CzcR.
  
    0.413
yycF_1
Transcriptional regulatory protein YycF.
  
    0.413
hssR
Heme response regulator HssR.
  
    0.413
regX3_2
Sensory transduction protein regX3.
  
    0.413
srrA_1
Transcriptional regulatory protein SrrA.
  
    0.413
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.