Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OPX44172.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
nuoI
NADH-quinone oxidoreductase subunit I.
 
    0.844
parB
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
  
 
 0.827
noc
Nucleoid occlusion protein; Belongs to the ParB family.
  
 
 0.827
porC_2
Pyruvate synthase subunit PorC.
 
     0.807
korB_1
2-oxoglutarate oxidoreductase subunit KorB.
 
   
 0.792
korA_1
2-oxoglutarate oxidoreductase subunit KorA.
 
     0.786
tcdA
tRNA threonylcarbamoyladenosine dehydratase.
       0.661
OPX45446.1
Beta-monoglucosyldiacylglycerol synthase.
  
 
 0.613
icaA
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
  
 
 0.613
OPX42957.1
Putative glycosyl transferase.
  
 
 0.613
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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