STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifD_1Nitrogenase molybdenum-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family. (503 aa)    
Predicted Functional Partners:
anfK_2
Nitrogenase iron-iron protein beta chain.
 
0.934
nifH1_7
Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 0.861
ssuA_2
Putative aliphatic sulfonates-binding protein precursor.
 
     0.829
OPX42511.1
Dinitrogenase iron-molybdenum cofactor.
 
  
 0.795
nifB_4
FeMo cofactor biosynthesis protein NifB.
 
  
 0.793
nifH1_4
Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 0.768
nifB_5
FeMo cofactor biosynthesis protein NifB.
 
  
 0.763
nifK_2
Nitrogenase molybdenum-iron protein beta chain.
 
0.750
chlB
Light-independent protochlorophyllide reductase subunit B.
 
0.750
bchB_3
Light-independent protochlorophyllide reductase subunit B.
 
0.749
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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