STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX43775.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
hsdR
Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.769
OPX42071.1
Type I restriction modification DNA specificity domain protein.
  
    0.755
OPX44476.1
Putative two-component membrane permease complex subunit.
  
    0.457
OPX42073.1
Putative type I restriction enzymeP M protein.
  
    0.429
dhaT_3
1,3-propanediol dehydrogenase.
       0.426
OPX45019.1
Aminopeptidase 2.
  
     0.408
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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