STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX43675.1Hypothetical protein; Copper amine oxidase N-terminal domain. (630 aa)    
Predicted Functional Partners:
OPX43351.1
Hypothetical protein; S-layer homology domain.
  
     0.770
celCCG_3
Endoglucanase G precursor.
  
     0.768
OPX45187.1
Lanthionine synthetase C-like protein.
  
     0.763
OPX44265.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.761
xynZ_1
Endo-1,4-beta-xylanase Z precursor.
  
     0.736
ancA_1
Cellulosome-anchoring protein precursor.
  
     0.705
OPX43414.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.703
OPX42205.1
Hypothetical protein; NfeD-like C-terminal, partner-binding.
  
     0.703
OPX42769.1
Hypothetical protein.
  
     0.694
hhoB
Putative serine protease HhoB precursor.
 
     0.686
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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