STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX43332.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
OPX45569.1
Protein 25-like lysozyme.
  
     0.772
OPX45571.1
Phage-related baseplate assembly protein.
  
     0.772
OPX45575.1
T4-like virus tail tube protein gp19.
  
     0.772
OPX45577.1
T4-like virus tail tube protein gp19.
  
     0.772
ftsH_3
ATP-dependent zinc metalloprotease FtsH.
  
     0.770
OPX45572.1
Phage late control protein Gpd.
  
     0.769
OPX45573.1
Hypothetical protein.
  
     0.769
OPX45568.1
Hypothetical protein.
  
     0.768
OPX45578.1
Phage tail sheath protein.
  
     0.768
OPX45576.1
Hypothetical protein.
  
     0.765
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.