STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnB_6Nitrogen regulatory protein P-II. (121 aa)    
Predicted Functional Partners:
glnB_7
Nitrogen regulatory protein P-II.
 
   
0.830
amt
Ammonia channel precursor; Belongs to the P(II) protein family.
 
0.798
glnB_5
Nitrogen regulatory protein P-II.
 
    0.797
nrgA_1
Ammonium transporter NrgA.
  
 0.773
nrgA_2
Ammonium transporter NrgA.
  
 0.773
glnB_8
Nitrogen regulatory protein P-II.
 
    0.724
vnfD
Nitrogenase vanadium-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family.
  
 
 0.717
nifH1_3
Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.709
vnfG
Nitrogenase vanadium-iron protein delta chain.
       0.651
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.646
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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