STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agrB_3Accessory protein regulator protein B. (207 aa)    
Predicted Functional Partners:
dpiB
Sensor histidine kinase DpiB.
 
 
 0.870
citS_2
Sensor protein CitS.
 
  
  0.774
agrB_2
Accessory protein regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
  
  
 
0.763
dcuS
Sensor histidine kinase DcuS.
 
  
  0.753
OPX45187.1
Lanthionine synthetase C-like protein.
  
    0.701
citS_1
Sensor protein CitS.
 
 
 0.638
OPX42752.1
PRC-barrel domain protein.
  
     0.612
OPX45526.1
Hypothetical protein.
  
     0.590
OPX43227.1
Hypothetical protein.
       0.566
OPX42492.1
Flagellar hook-length control protein FliK.
  
     0.545
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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