STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX43304.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
celE
Endoglucanase E precursor.
    
  0.793
celCCA_2
Endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.793
rsiW
anti-sigma-W factor RsiW.
  
     0.591
OPX46281.1
FHA domain protein.
 
  
 0.583
OPX46306.1
Putative amidase domain protein.
  
     0.575
OPX44089.1
EcsC protein family protein.
  
     0.560
OPX45554.1
Hypothetical protein.
 
     0.552
OPX43305.1
Hypothetical protein.
       0.529
OPX42492.1
Flagellar hook-length control protein FliK.
  
     0.529
OPX44263.1
Subtilase family protein.
  
 
  0.508
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.