STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX43310.1Polysaccharide biosynthesis protein. (432 aa)    
Predicted Functional Partners:
fcl_1
GDP-L-fucose synthase.
  
  
 0.800
epsL_1
Putative sugar transferase EpsL.
  
  
 0.756
rffG
dTDP-glucose 4,6-dehydratase 2; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.718
kfoC_2
Chondroitin synthase.
  
  
 0.707
OPX43748.1
Glycosyl transferases group 1.
  
 
 0.672
OPX43308.1
Hypothetical protein.
       0.657
OPX45408.1
Hypothetical protein.
  
  
 0.607
gtaB_1
UTP--glucose-1-phosphate uridylyltransferase.
  
  
 0.607
rmlA2
Glucose-1-phosphate thymidylyltransferase 2; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.607
OPX45903.1
Hypothetical protein.
  
 
 0.585
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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