STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPX43188.1Hypothetical protein. (449 aa)    
Predicted Functional Partners:
OPX43414.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.570
OPX43748.1
Glycosyl transferases group 1.
  
 
 0.497
OPX43187.1
Hypothetical protein.
       0.497
OPX44196.1
Transglutaminase-like superfamily protein.
  
     0.492
OPX45446.1
Beta-monoglucosyldiacylglycerol synthase.
  
 
 0.479
icaA
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
  
 
 0.479
OPX42957.1
Putative glycosyl transferase.
  
 
 0.479
OPX42373.1
Beta-monoglucosyldiacylglycerol synthase.
  
 
 0.479
aadK
Aminoglycoside 6-adenylyltransferase.
  
     0.477
OPX45679.1
Hypothetical protein.
  
 
 0.471
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.