Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dltCD-alanine--poly(phosphoribitol) ligase subunit 2. (80 aa)    
Predicted Functional Partners:
patA_2
Peptidoglycan O-acetyltransferase; Belongs to the membrane-bound acyltransferase family.
 
 0.972
tycC_2
Tyrocidine synthase 3.
 
  0.950
ppsD_1
Plipastatin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.894
mbtB_1
Phenyloxazoline synthase MbtB.
 
 
 0.871
gltB_2
Ferredoxin-dependent glutamate synthase 1.
     
 0.869
mbtB_2
Phenyloxazoline synthase MbtB; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.846
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 0.820
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 0.813
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 0.808
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
  0.804
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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