STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xsaXylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. (326 aa)    
Predicted Functional Partners:
xynB_3
Endo-1,4-beta-xylanase B.
 
 0.918
cex
Exoglucanase/xylanase precursor.
 
 0.899
axe1-6A
Carbohydrate acetyl esterase/feruloyl esterase precursor.
  
 0.884
OPX45688.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.876
OPX43402.1
Hypothetical protein.
  
  
 0.807
OPX43793.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43A precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.802
aguA
Xylan alpha-(1->2)-glucuronosidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.791
abfA_1
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase.
    
 0.780
abfA_2
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase.
    
 0.780
OPX45602.1
beta-D-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.768
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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