SMRZ_LOCUS739 protein (Schistosoma margrebowiei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SMRZ_LOCUS739

Uncharacterized protein. (209 aa)

Predicted Functional Partners:

SMRZ_LOCUS4338

0.946

SMRZ_LOCUS5771

0.946

SMRZ_LOCUS480

0.929

A0A183MQY2

0.925

A0A183M8F2

0.916

A0A183MMQ4

0.916

A0A183LLG9

0.882

SMRZ_LOCUS5578

0.868

A0A183MZI5

0.868

A0A183MIW9

0.863

Your Current Organism:

Schistosoma margrebowiei

NCBI taxonomy Id: 48269
Other names: S. margrebowiei

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183LLG9	A0A183MQY2	A0A183LLG9	A0A183MQY2	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.998
A0A183LLG9	SMRZ_LOCUS480	A0A183LLG9	A0A183L9K5	t-SNARE coiled-coil homology domain-containing protein.	Longin domain-containing protein; Belongs to the synaptobrevin family.	0.998
A0A183LLG9	SMRZ_LOCUS739	A0A183LLG9	A0A183LAB4	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.882
A0A183M8F2	A0A183MIW9	A0A183M8F2	A0A183MIW9	Uncharacterized protein.	Uncharacterized protein.	0.786
A0A183M8F2	A0A183MZI5	A0A183M8F2	A0A183MZI5	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A183M8F2	SMRZ_LOCUS4338	A0A183M8F2	A0A183LKL3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.915
A0A183M8F2	SMRZ_LOCUS5578	A0A183M8F2	A0A183LP53	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A183M8F2	SMRZ_LOCUS5771	A0A183M8F2	A0A183LPP6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.915
A0A183M8F2	SMRZ_LOCUS739	A0A183M8F2	A0A183LAB4	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A183MIW9	A0A183M8F2	A0A183MIW9	A0A183M8F2	Uncharacterized protein.	Uncharacterized protein.	0.786
A0A183MIW9	A0A183MMQ4	A0A183MIW9	A0A183MMQ4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.786
A0A183MIW9	A0A183MZI5	A0A183MIW9	A0A183MZI5	Uncharacterized protein.	Uncharacterized protein.	0.764
A0A183MIW9	SMRZ_LOCUS4338	A0A183MIW9	A0A183LKL3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.615
A0A183MIW9	SMRZ_LOCUS5578	A0A183MIW9	A0A183LP53	Uncharacterized protein.	Uncharacterized protein.	0.764
A0A183MIW9	SMRZ_LOCUS5771	A0A183MIW9	A0A183LPP6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.615
A0A183MIW9	SMRZ_LOCUS739	A0A183MIW9	A0A183LAB4	Uncharacterized protein.	Uncharacterized protein.	0.863
A0A183MMQ4	A0A183MIW9	A0A183MMQ4	A0A183MIW9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.786
A0A183MMQ4	A0A183MZI5	A0A183MMQ4	A0A183MZI5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.950
A0A183MMQ4	SMRZ_LOCUS4338	A0A183MMQ4	A0A183LKL3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.915
A0A183MMQ4	SMRZ_LOCUS5578	A0A183MMQ4	A0A183LP53	Protein kinase domain-containing protein.	Uncharacterized protein.	0.950