STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMRZ_LOCUS5376Uncharacterized protein. (469 aa)    
Predicted Functional Partners:
SMRZ_LOCUS494
Laminin N-terminal domain-containing protein.
 
 
 0.997
SMRZ_LOCUS490
Uncharacterized protein.
   
0.991
SMRZ_LOCUS492
Laminin IV type A domain-containing protein.
 
 
 0.991
SMRZ_LOCUS4260
Uncharacterized protein.
   
0.991
A0A183MLQ3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.982
A0A183N460
Laminin N-terminal domain-containing protein.
 
 0.979
SMRZ_LOCUS894
Uncharacterized protein.
    
 0.849
SMRZ_LOCUS6954
Uncharacterized protein.
    
 0.849
SMRZ_LOCUS6956
Uncharacterized protein.
    
 0.849
A0A183LU03
Uncharacterized protein.
    
 0.849
Your Current Organism:
Schistosoma margrebowiei
NCBI taxonomy Id: 48269
Other names: S. margrebowiei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.