STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMRZ_LOCUS6010Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)    
Predicted Functional Partners:
SMRZ_LOCUS3376
Uncharacterized protein.
   
 0.999
A0A183LTP3
Uncharacterized protein.
   
 0.999
A0A183MRB6
WD_REPEATS_REGION domain-containing protein.
   
 0.999
A0A183MU66
Nop domain-containing protein.
   
 0.999
A0A183N2X6
Nop domain-containing protein.
   
 0.999
A0A183MW92
Uncharacterized protein.
  
 0.998
A0A183MIA1
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.997
A0A183MIR8
Nop domain-containing protein.
   
 0.997
A0A183MML4
Nop domain-containing protein.
    
 0.997
SMRZ_LOCUS1513
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.996
Your Current Organism:
Schistosoma margrebowiei
NCBI taxonomy Id: 48269
Other names: S. margrebowiei
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