STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183MM10RING-type domain-containing protein. (798 aa)    
Predicted Functional Partners:
A0A183MK14
Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.817
SMRZ_LOCUS8031
Ribosomal_S10 domain-containing protein.
    
 
 0.725
A0A183M367
S10_plectin domain-containing protein.
    
 
 0.710
SMRZ_LOCUS1112
WD_REPEATS_REGION domain-containing protein.
    
 
 0.701
A0A183MVQ3
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
    0.664
A0A183ML66
GYF domain-containing protein.
    
 
 0.662
A0A183MWG9
Uncharacterized protein.
    
 
 0.662
A0A183MIY6
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.633
A0A183MJB9
Uncharacterized protein.
    
 
 0.613
A0A183MJC0
Uncharacterized protein.
    
 
 0.613
Your Current Organism:
Schistosoma margrebowiei
NCBI taxonomy Id: 48269
Other names: S. margrebowiei
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