Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE51721.1 | SDE51753.1 | SAMN04488243_10314 | SAMN04488243_10315 | Hypothetical protein. | Peroxiredoxin Q/BCP. | 0.748 |
SDE51721.1 | metG | SAMN04488243_10314 | SAMN04488243_10317 | Hypothetical protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.511 |
SDE51721.1 | mqnC | SAMN04488243_10314 | SAMN04488243_10313 | Hypothetical protein. | De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.562 |
SDE51721.1 | rpiA | SAMN04488243_10314 | SAMN04488243_10316 | Hypothetical protein. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.748 |
SDE51753.1 | SDE51721.1 | SAMN04488243_10315 | SAMN04488243_10314 | Peroxiredoxin Q/BCP. | Hypothetical protein. | 0.748 |
SDE51753.1 | SDE97455.1 | SAMN04488243_10315 | SAMN04488243_11842 | Peroxiredoxin Q/BCP. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.467 |
SDE51753.1 | SDF18282.1 | SAMN04488243_10315 | SAMN04488243_1308 | Peroxiredoxin Q/BCP. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.426 |
SDE51753.1 | metG | SAMN04488243_10315 | SAMN04488243_10317 | Peroxiredoxin Q/BCP. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.604 |
SDE51753.1 | mqnC | SAMN04488243_10315 | SAMN04488243_10313 | Peroxiredoxin Q/BCP. | De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.517 |
SDE51753.1 | rpiA | SAMN04488243_10315 | SAMN04488243_10316 | Peroxiredoxin Q/BCP. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.824 |
SDE97455.1 | SDE51753.1 | SAMN04488243_11842 | SAMN04488243_10315 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peroxiredoxin Q/BCP. | 0.467 |
SDE97455.1 | metG | SAMN04488243_11842 | SAMN04488243_10317 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.923 |
SDF18282.1 | SDE51753.1 | SAMN04488243_1308 | SAMN04488243_10315 | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Peroxiredoxin Q/BCP. | 0.426 |
SDF18282.1 | metG | SAMN04488243_1308 | SAMN04488243_10317 | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.498 |
metG | SDE51721.1 | SAMN04488243_10317 | SAMN04488243_10314 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Hypothetical protein. | 0.511 |
metG | SDE51753.1 | SAMN04488243_10317 | SAMN04488243_10315 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Peroxiredoxin Q/BCP. | 0.604 |
metG | SDE97455.1 | SAMN04488243_10317 | SAMN04488243_11842 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.923 |
metG | SDF18282.1 | SAMN04488243_10317 | SAMN04488243_1308 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.498 |
metG | rpiA | SAMN04488243_10317 | SAMN04488243_10316 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.715 |
mqnC | SDE51721.1 | SAMN04488243_10313 | SAMN04488243_10314 | De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | Hypothetical protein. | 0.562 |
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