STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE52271.1L-aminopeptidase/D-esterase. (328 aa)    
Predicted Functional Partners:
SDE52308.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
       0.566
SDE52215.1
Threonine dehydrogenase.
       0.562
SDE52243.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
       0.562
SDE52097.1
Ca-activated chloride channel family protein.
  
    0.453
SDE52127.1
Ca-activated chloride channel family protein.
  
    0.453
SDE52152.1
Protein of unknown function DUF58.
       0.446
SDE52186.1
MoxR-like ATPase.
       0.446
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.