STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE57756.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
SDE57693.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
 0.971
SDE57728.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.806
SDF41996.1
Type IV pilus assembly protein PilB.
  
 0.776
SDE57661.1
Protein of unknown function.
       0.715
SDE61600.1
Type IV pilus assembly protein PilC.
  
  
 0.697
SDF08685.1
Competence protein ComEC.
  
  
 0.602
plsY-2
Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.552
SDE57813.1
Hypothetical protein.
       0.545
SDE57838.1
Uncharacterized conserved protein, contains HEPN domain.
       0.498
SDE57867.1
Bacillithiol biosynthesis deacetylase BshB1.
       0.498
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.