STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE66457.1Putative zinc-or iron-chelating domain-containing protein. (201 aa)    
Predicted Functional Partners:
SDE66392.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
 
     0.846
SDE66421.1
Hypothetical protein.
       0.778
SDE48833.1
SWIM zinc finger.
  
     0.675
SDE89953.1
Hypothetical protein.
 
     0.655
SDE56179.1
Autotransporter translocation and assembly factor TamB.
  
     0.653
SDE98860.1
Transposase DDE domain-containing protein.
  
     0.637
SDF26665.1
Peptide chain release factor 1 (eRF1).
  
     0.607
SDE43215.1
Hypothetical protein.
  
     0.589
SDE46696.1
Nuclease-related domain-containing protein.
  
     0.571
SDE49956.1
Protein of unknown function.
  
     0.555
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.