STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE75140.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (225 aa)    
Predicted Functional Partners:
SDE75121.1
Signal transduction histidine kinase.
 
  0.960
SDE59002.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.893
SDF48835.1
Signal transduction histidine kinase.
  
  0.886
SDE89709.1
Signal transduction histidine kinase.
  
  0.882
SDE40430.1
Hypothetical protein.
 
  0.879
SDE81055.1
Histidine kinase.
 
  0.879
SDE76042.1
Hypothetical protein.
 
  0.878
SDE41635.1
Two-component system, OmpR family, sensor histidine kinase TctE.
  
  0.871
SDE43074.1
Two-component system, OmpR family, sensor histidine kinase BaeS.
 
  0.846
SDE75093.1
Phosphate transport system protein; Plays a role in the regulation of phosphate uptake.
  
  
 0.810
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.