STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE82913.1phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (445 aa)    
Predicted Functional Partners:
SDE82886.1
acyl-CoA thioesterase.
 
 
 0.987
SDE83804.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
 0.911
SDE83760.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.909
SDE60460.1
phenylacetate-CoA ligase.
  
  
 
0.903
SDE83735.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
  
 0.900
SDE83777.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 
 0.888
SDE82784.1
Branched-chain amino acid transport system substrate-binding protein.
 
    0.810
SDE82861.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
  0.792
SDE82836.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.791
SDE82939.1
Thioesterase superfamily.
       0.788
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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