STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE84731.1Glycolate oxidase iron-sulfur subunit. (418 aa)    
Predicted Functional Partners:
SDE84777.1
Glycolate oxidase.
 
 0.996
SDE84754.1
Glycolate oxidase FAD binding subunit.
 
 
 0.992
SDE61686.1
Glycolate oxidase.
 
 0.968
SDE84800.1
Malate synthase; Belongs to the malate synthase family.
  
 
 0.946
SDE80785.1
Isocitrate lyase.
     
 0.876
SDF28286.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.876
SDF12217.1
Serine-pyruvate aminotransferase apoenzyme.
    
  0.873
SDE69631.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.872
SDF08279.1
Hypothetical protein.
 
 
 0.864
SDE75848.1
L-lactate dehydrogenase complex protein LldF.
 
0.822
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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