STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE93264.1NitT/TauT family transport system permease protein. (554 aa)    
Predicted Functional Partners:
SDE93289.1
NitT/TauT family transport system ATP-binding protein.
 
   
 0.974
SDE93314.1
Hypothetical protein.
       0.557
SDE93240.1
Broad-specificity cellobiase.
       0.463
SDE93155.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.428
SDE93182.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.428
SDE93212.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.428
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.