Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE78126.1 | SDE90800.1 | SAMN04488243_11026 | SAMN04488243_11546 | L-alanine dehydrogenase. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.932 |
SDE78126.1 | SDF01037.1 | SAMN04488243_11026 | SAMN04488243_12020 | L-alanine dehydrogenase. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.885 |
SDE78126.1 | SDF08176.1 | SAMN04488243_11026 | SAMN04488243_12410 | L-alanine dehydrogenase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.965 |
SDE78126.1 | SDF12217.1 | SAMN04488243_11026 | SAMN04488243_12626 | L-alanine dehydrogenase. | Serine-pyruvate aminotransferase apoenzyme. | 0.874 |
SDE90800.1 | SDE78126.1 | SAMN04488243_11546 | SAMN04488243_11026 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | L-alanine dehydrogenase. | 0.932 |
SDE90800.1 | SDF01037.1 | SAMN04488243_11546 | SAMN04488243_12020 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.932 |
SDF00885.1 | SDF00946.1 | SAMN04488243_12015 | SAMN04488243_12017 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.782 |
SDF00885.1 | SDF01037.1 | SAMN04488243_12015 | SAMN04488243_12020 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.564 |
SDF00885.1 | SDF01066.1 | SAMN04488243_12015 | SAMN04488243_12021 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family. | 0.564 |
SDF00885.1 | SDF01091.1 | SAMN04488243_12015 | SAMN04488243_12022 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | Hypothetical protein. | 0.564 |
SDF00885.1 | SDF01125.1 | SAMN04488243_12015 | SAMN04488243_12023 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | Hypothetical protein. | 0.436 |
SDF00885.1 | truB | SAMN04488243_12015 | SAMN04488243_12019 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.572 |
SDF00946.1 | SDF00885.1 | SAMN04488243_12017 | SAMN04488243_12015 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.782 |
SDF00946.1 | SDF01037.1 | SAMN04488243_12017 | SAMN04488243_12020 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.570 |
SDF00946.1 | SDF01066.1 | SAMN04488243_12017 | SAMN04488243_12021 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family. | 0.571 |
SDF00946.1 | SDF01091.1 | SAMN04488243_12017 | SAMN04488243_12022 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.566 |
SDF00946.1 | SDF01125.1 | SAMN04488243_12017 | SAMN04488243_12023 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.436 |
SDF00946.1 | truB | SAMN04488243_12017 | SAMN04488243_12019 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.798 |
SDF01037.1 | SDE78126.1 | SAMN04488243_12020 | SAMN04488243_11026 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | L-alanine dehydrogenase. | 0.885 |
SDF01037.1 | SDE90800.1 | SAMN04488243_12020 | SAMN04488243_11546 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.932 |
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