Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF28307.1 | SDF28348.1 | SAMN04488243_1383 | SAMN04488243_1384 | PmbA protein. | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | 0.876 |
SDF28307.1 | SDF28383.1 | SAMN04488243_1383 | SAMN04488243_1385 | PmbA protein. | DNA polymerase III, delta subunit. | 0.707 |
SDF28307.1 | SDF28420.1 | SAMN04488243_1383 | SAMN04488243_1386 | PmbA protein. | glutaryl-CoA dehydrogenase. | 0.597 |
SDF28307.1 | SDF28456.1 | SAMN04488243_1383 | SAMN04488243_1387 | PmbA protein. | Hypothetical protein. | 0.480 |
SDF28307.1 | SDF28490.1 | SAMN04488243_1383 | SAMN04488243_1388 | PmbA protein. | Protein of unknown function. | 0.480 |
SDF28307.1 | SDF28525.1 | SAMN04488243_1383 | SAMN04488243_1389 | PmbA protein. | Hypothetical protein. | 0.480 |
SDF28348.1 | SDF28307.1 | SAMN04488243_1384 | SAMN04488243_1383 | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | PmbA protein. | 0.876 |
SDF28348.1 | SDF28383.1 | SAMN04488243_1384 | SAMN04488243_1385 | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | DNA polymerase III, delta subunit. | 0.707 |
SDF28348.1 | SDF28420.1 | SAMN04488243_1384 | SAMN04488243_1386 | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | glutaryl-CoA dehydrogenase. | 0.599 |
SDF28348.1 | SDF28456.1 | SAMN04488243_1384 | SAMN04488243_1387 | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | Hypothetical protein. | 0.480 |
SDF28348.1 | SDF28490.1 | SAMN04488243_1384 | SAMN04488243_1388 | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | Protein of unknown function. | 0.480 |
SDF28348.1 | SDF28525.1 | SAMN04488243_1384 | SAMN04488243_1389 | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | Hypothetical protein. | 0.480 |
SDF28383.1 | SDF28307.1 | SAMN04488243_1385 | SAMN04488243_1383 | DNA polymerase III, delta subunit. | PmbA protein. | 0.707 |
SDF28383.1 | SDF28348.1 | SAMN04488243_1385 | SAMN04488243_1384 | DNA polymerase III, delta subunit. | Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62. | 0.707 |
SDF28383.1 | SDF28420.1 | SAMN04488243_1385 | SAMN04488243_1386 | DNA polymerase III, delta subunit. | glutaryl-CoA dehydrogenase. | 0.683 |
SDF28383.1 | SDF28456.1 | SAMN04488243_1385 | SAMN04488243_1387 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.541 |
SDF28383.1 | SDF28490.1 | SAMN04488243_1385 | SAMN04488243_1388 | DNA polymerase III, delta subunit. | Protein of unknown function. | 0.541 |
SDF28383.1 | SDF28525.1 | SAMN04488243_1385 | SAMN04488243_1389 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.628 |
SDF28383.1 | tsaD | SAMN04488243_1385 | SAMN04488243_13810 | DNA polymerase III, delta subunit. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.472 |
SDF28420.1 | SDF28307.1 | SAMN04488243_1386 | SAMN04488243_1383 | glutaryl-CoA dehydrogenase. | PmbA protein. | 0.597 |
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