Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE47063.1 | SDF29955.1 | SAMN04488243_10223 | SAMN04488243_13914 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.523 |
SDE58117.1 | SDF29955.1 | SAMN04488243_10475 | SAMN04488243_13914 | Hypothetical protein. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.523 |
SDE90287.1 | SDF01526.1 | SAMN04488243_11528 | SAMN04488243_12037 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.530 |
SDE90287.1 | SDF29955.1 | SAMN04488243_11528 | SAMN04488243_13914 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.619 |
SDF01526.1 | SDE90287.1 | SAMN04488243_12037 | SAMN04488243_11528 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.530 |
SDF01526.1 | SDF29955.1 | SAMN04488243_12037 | SAMN04488243_13914 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.616 |
SDF03729.1 | SDF29955.1 | SAMN04488243_12141 | SAMN04488243_13914 | Antitoxin HicB. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.523 |
SDF29885.1 | SDF29922.1 | SAMN04488243_13912 | SAMN04488243_13913 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. | Hypothetical protein. | 0.773 |
SDF29885.1 | SDF29955.1 | SAMN04488243_13912 | SAMN04488243_13914 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.773 |
SDF29885.1 | argG | SAMN04488243_13912 | SAMN04488243_13910 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.942 |
SDF29885.1 | argH | SAMN04488243_13912 | SAMN04488243_13911 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. | Argininosuccinate lyase. | 0.989 |
SDF29885.1 | carA | SAMN04488243_13912 | SAMN04488243_13915 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.825 |
SDF29922.1 | SDF29885.1 | SAMN04488243_13913 | SAMN04488243_13912 | Hypothetical protein. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. | 0.773 |
SDF29922.1 | SDF29955.1 | SAMN04488243_13913 | SAMN04488243_13914 | Hypothetical protein. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.973 |
SDF29922.1 | argG | SAMN04488243_13913 | SAMN04488243_13910 | Hypothetical protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.773 |
SDF29922.1 | argH | SAMN04488243_13913 | SAMN04488243_13911 | Hypothetical protein. | Argininosuccinate lyase. | 0.773 |
SDF29922.1 | carA | SAMN04488243_13913 | SAMN04488243_13915 | Hypothetical protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.773 |
SDF29955.1 | SDE47063.1 | SAMN04488243_13914 | SAMN04488243_10223 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.523 |
SDF29955.1 | SDE58117.1 | SAMN04488243_13914 | SAMN04488243_10475 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Hypothetical protein. | 0.523 |
SDF29955.1 | SDE90287.1 | SAMN04488243_13914 | SAMN04488243_11528 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.619 |
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