STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF33461.1Uncharacterized conserved protein, contains HEPN domain. (111 aa)    
Predicted Functional Partners:
SDF33485.1
Hypothetical protein.
 
    0.951
SDE97400.1
Hypothetical protein.
 
    0.793
SDE57813.1
Hypothetical protein.
 
    0.791
SDF33521.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.773
SDF33557.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
       0.773
SDF33399.1
Hypothetical protein.
       0.773
SDF33430.1
Alpha-glucosidase.
       0.773
SDE40048.1
Hypothetical protein.
 
    0.769
mutS2
DNA mismatch repair protein, MutS family; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.709
SDF33598.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.598
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.