Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A163IUU6 | A0A163JLC0 | Uncharacterized protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.892 |
A0A163IUU6 | A0A163JLF5 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.941 |
A0A163IUU6 | A0A168LC01 | Uncharacterized protein. | Brix domain-containing protein. | 0.928 |
A0A163IUU6 | A0A168NSS0 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.919 |
A0A163IUU6 | A0A168PS04 | Uncharacterized protein. | NUC153 domain-containing protein. | 0.921 |
A0A163IUU6 | A0A168QDU3 | Uncharacterized protein. | RRM domain-containing protein. | 0.909 |
A0A163IUU6 | A0A168QQG7 | Uncharacterized protein. | Uncharacterized protein. | 0.920 |
A0A163IUU6 | A0A168QYU1 | Uncharacterized protein. | Uncharacterized protein. | 0.956 |
A0A163IUU6 | A0A168SEA0 | Uncharacterized protein. | Uncharacterized protein. | 0.900 |
A0A163IUU6 | A0A168TA47 | Uncharacterized protein. | Brix domain-containing protein. | 0.914 |
A0A163JLC0 | A0A163IUU6 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | Uncharacterized protein. | 0.892 |
A0A163JLC0 | A0A163JLF5 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.990 |
A0A163JLC0 | A0A168LC01 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | Brix domain-containing protein. | 0.999 |
A0A163JLC0 | A0A168NSS0 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.963 |
A0A163JLC0 | A0A168PS04 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | NUC153 domain-containing protein. | 0.870 |
A0A163JLC0 | A0A168QDU3 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | RRM domain-containing protein. | 0.997 |
A0A163JLC0 | A0A168QQG7 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | Uncharacterized protein. | 0.981 |
A0A163JLC0 | A0A168QYU1 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | Uncharacterized protein. | 0.924 |
A0A163JLC0 | A0A168SEA0 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | Uncharacterized protein. | 0.898 |
A0A163JLC0 | A0A168TA47 | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | Brix domain-containing protein. | 0.958 |
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