STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163IZ74NUC153 domain-containing protein. (732 aa)    
Predicted Functional Partners:
A0A163JK17
RNA helicase.
   
 
 0.999
A0A163JYU2
U3 small nucleolar RNA-associated protein 22.
   
 
 0.998
A0A168QLD1
Sas10 domain-containing protein.
   
 
 0.998
A0A168T3Z9
WD_REPEATS_REGION domain-containing protein.
   
 
 0.998
A0A168R3U6
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.997
A0A163K032
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.995
A0A163JLA3
Uncharacterized protein.
   
 
 0.993
A0A163JLA5
Uncharacterized protein.
   
 
 0.993
A0A168LM57
Uncharacterized protein.
   
 
 0.993
A0A168LAM2
Uncharacterized protein.
   
 
 0.980
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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