STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163J308Reverse transcriptase domain-containing protein. (613 aa)    
Predicted Functional Partners:
A0A168R5U6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.843
A0A163K8Q8
Uncharacterized protein.
    
 0.831
A0A168RL29
Uncharacterized protein.
    
 0.831
A0A168S3Z2
Ubiquitin-like domain-containing protein.
    
 0.775
A0A168LQJ5
Uncharacterized protein.
    
 0.766
A0A168PD90
Uncharacterized protein.
    
 0.766
A0A168KYN9
Uncharacterized protein.
    
  0.747
A0A168MLT3
Uncharacterized protein.
    
  0.747
A0A163JQM8
BRCT domain-containing protein.
    
 0.730
A0A168NXM3
Uncharacterized protein.
    
 0.730
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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