STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163J3D8Uncharacterized protein. (323 aa)    
Predicted Functional Partners:
A0A168R5U6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.801
A0A168R4W7
MIF4G domain-containing protein.
    
 0.756
A0A168NTR9
Nuclear cap-binding protein subunit 2.
    
 0.753
A0A168MKS7
RRM domain-containing protein.
    
 0.707
A0A163K963
S1 motif domain-containing protein.
   
 0.706
A0A168S1Q0
Uncharacterized protein.
    
 0.695
A0A163JLQ9
Matrin-type domain-containing protein.
    
 0.689
A0A163MV86
C3H1-type domain-containing protein.
    
 0.689
A0A168L0N1
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.687
A0A168MR46
RPOL4c domain-containing protein.
    
 0.675
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.