STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163J9B9Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
A0A163KW73
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.984
A0A168RR10
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.984
A0A168LHP3
RRF domain-containing protein.
  
  
 0.872
A0A163KHV3
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
   
 0.856
A0A163IZ68
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.812
A0A163IVS1
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.784
A0A168L928
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.784
A0A168NQV6
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.784
A0A168PQ09
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.784
A0A163IVK8
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.782
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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